`rbatools.process_block` module

Classes

class ProcessBlock (ancestors: InformationBlock)

Class holding information on the processes in the model.

Elements : dict: Each model-process is represented by a key. The values, holding information on each process, are dicts with predefined keys: 'ID' : process ID in model (type str) 'Name' : name of process (same as key) (type str) 'Initiation' : reaction-string of initiation (type list) 'Composition' : Which proteins the process-machinery is composed of and how many (type dict) 'Components' : Substrates to process (type dict) 'Capacity_Constraint' : ID of associated capacity constraint

def from_files(self, model, Info): Derive reaction-info from RBA-model.

Input

RBA-model

Returns

Dictionary with process-info.
def overview(self): Derive statistics on processes.

Returns

Dictionary with general numbers on processes.